1. Jinyuan Sun, Tong Zhu, Yinglu Cui*, Bian Wu*. Structure-based self-supervised learning enables ultrafast protein stability prediction upon mutation. The Innovation 2025, 6(1):100750.

2. Yinglu Cui#*, Yanchun Chen#, Jinyuan Sun#, Tong Zhu#, Hua Pang, Chunli Li, Wen-Chao Geng, Bian Wu*. Computational redesign of a hydrolase for nearly complete PET depolymerization at industrially relevant high-solids loading, Nature Communications, 2024, 15: 1417.

3. Yue Tang#, Xiaoying Tian#, Min Wang#, Yinglu Cui#, Yang She#, Zhaoxiang Shi, Jiaqi Liu,Huijin Mao, Lilu Liu, Chao Li, Yuwei Zhang, Pengwei Li, Yue Ma, Jinyuan Sun, Qing Du, Jie Li, Jun Wang, De-feng Li, Bian Wu*, Feng Shao*, Yihua Chen*. The β-d-manno-heptoses are immune agonists across kingdoms. Science, 2024, 385: 678-684.

4. Zhu, Tong, Sun, Jinyuan, Pang, Hua, Wu, Bian*. Computational Enzyme Redesign Enhances Tolerance to Denaturants for Peptide C-Terminal Amidation, JACS Au 2024, 4(2): 788–797.

5. Li, Ruifeng#, Schmidt, Marcel#, Zhu, Tong#, Yang, Xinyu, Feng, Jing, Tian, Yu'e, Cui, Yinglu, Nuijens, Timo*, Wu, Bian*. Traceless enzymatic protein synthesis without ligation sites constraint, National Science Review 2022, 9: nwab158.

6. Zhu, Tong#, Cui, Yinglu#, Geng, Wenchao, Liu, Guoxia, Jiang, Huifeng, Li, Ruifeng, Wu, Bian*. Creating an Unusual Glycine-Rich Motif in a Peptide Amidase Leads to Versatile Protein C-Terminal Traceless Functionalization, ACS Catalysis 2022, 12(13): 8019–8026.

7. Cui, Yinglu#, Wang, Yinghui#, Tian, Wenya#, Bu, Yifan, Li, Tao, Cui, Xuexian, Zhu, Tong, Li, Ruifeng, Wu, Bian*. Development of a versatile and efficient C-N lyase platform for asymmetric hydroamination via computational enzyme redesign, Nature Catalysis 2021, 4(5): 364-373.  

8. Cui, Yinglu#, Chen, Yanchun#, Liu, Xinyue, Dong, Saijun, Tian, Yu' e, Qíao, Yuxin, Mitra, Ruchirn, Han, Jing, Li, Chunli, Han, Xu, Liu, Weidong, Chen, Quan, Wei, Wangqing, Wang, Xin, Du, Wenbin, Tang, Shuangyan, Xiang, Hua, Liu, Haiyan, Liang, Yong, Houk, Kendall N, Wu, Bian*. Computational redesign of a PETase for plastic biodegradation under ambient condition by the GRAPE strategy, ACS Catalysis 2021, 11(3): 1340-1350.  

9. Feng, Jing#, Li, Ruifeng#, Zhang, Shasha#, Bu, Yifan, Chen, Yanchun, Cui, Yinglu, Lin, Baixue, Chen, Yihun, Tao, Yong, Wu, Bian*. Bioretrosynthesis of functionalized N-heterocycles from glucose via One-pot tanden collaborations of designed microbes, Advanced Science 2020, 7(17): 201188.  

10. Li, Tao, Cui, Xuexian, Cui, Yinglu, Sun, Jinyuan, Chen, Yanchun, Zhu, Tong, Li, Chuijian, Li, Ruifeng, Wu, Bian*. Exploration of transaminase diversity for the oxidative conversion of natural amino acids into 2-Ketoacidsnd high-value chemicals, ACS Catalysis 2020, 10(14): 7950-7957.